RN7SL543P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SL543P RNA expression is significantly associated with the protein abundance of many other proteins, with 6,942 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SL543P-associated proteins across cancer lineages are PNO1, PRPF38A, and RCL1. Each is linked with RN7SL543P in more than 2 cancer types. Because this analysis shows association rather than direction, both RN7SL543P-to-partner and partner-to-RN7SL543P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SL543P versus PNO1 in GBM, with a Pearson correlation of -0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SL543P→partner) and Y-score (partner→RN7SL543P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPNO1 →-0.328-0.675<.001<.00133
GBMPRPF38A →-0.245-0.537<.001<.00133
GBMRCL1 →-0.195-0.435.006.00433
GBMGTF2E2 →-0.242-0.457<.001.00433
GBMTHOC5 →-0.228-0.604<.001<.00133
GBMRGL3_S512 →+0.537+1.130<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,942 associations by consensus.

RN7SL543P vs PNO1 — GBM

Per-sample scatter of RN7SL543P vs PNO1 in GBM (Pearson r = -0.40).

Explore this scatter interactively →

Exploration