RN7SL3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SL3 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,146 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SL3-associated proteins across cancer lineages are LMNB2, SMARCA2, and AGO1. Each is linked with RN7SL3 in more than 5 cancer types. Because this analysis shows association rather than direction, both RN7SL3-to-partner and partner-to-RN7SL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SL3 versus LMNB2 in LUAD, with a Pearson correlation of -0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SL3→partner) and Y-score (partner→RN7SL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADLMNB2 →-0.318-1.383<.001<.00135
HNSCSMARCA2 →-0.342-1.518<.001.00135
LSCCAGO1 →-0.249-0.946<.001<.00126
LUADSPAG9_S332 →+0.691+1.165<.001<.00125
BRCASPTLC2 →+0.326+0.930.004.00434
BRCASRP54 →+0.245+0.958<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,146 associations by consensus.

RN7SL3 vs LMNB2 — LUAD

Per-sample scatter of RN7SL3 vs LMNB2 in LUAD (Pearson r = -0.41).

Explore this scatter interactively →

Exploration