RN7SKP92

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP92 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,286 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RN7SKP92-associated GO terms across cancer lineages are Alternative mRNA splicing, via spliceosome, Regulation of alternative mRNA splicing, via spliceosome, and Regulation of post-translational protein modification. Each is linked with RN7SKP92 in more than 8 cancer types. Because this analysis shows association rather than direction, both RN7SKP92-to-partner and partner-to-RN7SKP92 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Alternative mRNA splicing, via spliceosome grouped by RN7SKP92-low versus RN7SKP92-high in COAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP92→partner) and Y-score (partner→RN7SKP92) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADAlternative mRNA splicing, via spliceosome →+0.175+0.067<.001.00228
COADRegulation of alternative mRNA splicing, via spliceosome →+0.179+0.124<.001.00428
UCECRegulation of post-translational protein modification →+0.159+0.078<.001.00919
UCECProtein polyubiquitination →+0.154+0.104<.001.00919
UCECRegulation of protein ubiquitination →+0.151+0.101<.001.00819
UCECRNA polymerase II preinitiation complex assembly →+0.115+0.110<.001.00919
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,286 associations by consensus.

Alternative mRNA splicing, via spliceosome by RN7SKP92 expression — COAD

Box plot of Alternative mRNA splicing, via spliceosome in RN7SKP92-low vs RN7SKP92-high samples in COAD.

Explore this box plot interactively →

Exploration