RN7SKP89

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP89 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,712 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible RN7SKP89-associated proteins across cancer lineages are SRSF9_S189, FUS, and SHANK3_S1570. Each is linked with RN7SKP89 in more than 2 cancer types. Because this analysis shows association rather than direction, both RN7SKP89-to-partner and partner-to-RN7SKP89 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP89→partner) and Y-score (partner→RN7SKP89) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSRSF9_S189 →-0.859-0.320<.001.00633
LSCCFUS →+0.378+0.168.001.00133
PDACSHANK3_S1570 →+0.354+0.299<.001<.00132
PDACCTNND1_Y291 →-0.720-0.382<.001.00332
HNSCAHNAK2_S1418 →-0.804-0.863.002.00132
HNSCAHNAK2_S1583 →-0.720-0.780.002.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,712 associations by consensus.

Exploration