RN7SKP88

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP88 RNA expression is significantly associated with the RNA expression of many other genes, with 98 significant associations in total. LAML shows the largest number of these associations.

The most reproducible RN7SKP88-associated genes across cancer lineages are MIR6815, MIR3978, and MIR3617. Each is linked with RN7SKP88 in more than 1 cancer types. Because this analysis shows association rather than direction, both RN7SKP88-to-partner and partner-to-RN7SKP88 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SKP88 versus MIR6815 in LAML, with a Pearson correlation of 0.38.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP88→partner) and Y-score (partner→RN7SKP88) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LAMLMIR6815 →+1.144+0.126<.001<.00132
BRCAMIR3978 →+0.634+0.005.004.00132
BRCAMIR3617 →+1.000+0.004<.001.00332
BRCASUMO2P12 →+0.513+0.003<.001.00932
CESCGAGE12J →+2.918+0.019<.001.00332
LAMLRNA5SP102 →+1.060+0.251<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 98 associations by consensus.

RN7SKP88 vs MIR6815 — LAML

Per-sample scatter of RN7SKP88 vs MIR6815 in LAML (Pearson r = 0.38).

Explore this scatter interactively →

Exploration