RN7SKP64

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP64 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,286 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SKP64-associated proteins across cancer lineages are ZC3H18_S532, PTGES3_S85, and SCAF1_S874. Each is linked with RN7SKP64 in more than 6 cancer types. Because this analysis shows association rather than direction, both RN7SKP64-to-partner and partner-to-RN7SKP64 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SKP64 versus ZC3H18_S532 in LSCC, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP64→partner) and Y-score (partner→RN7SKP64) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCZC3H18_S532 →+0.363+0.463<.001<.00137
LSCCPTGES3_S85 →-0.713-0.769<.001<.00136
GBMSCAF1_S874 →+0.525+0.762<.001<.00136
LSCCSETD1B_S211 →+0.467+0.814<.001<.00136
LSCCSF3B1_T426 →+0.379+0.515<.001<.00136
CCRCCSND1_S645 →-0.994-0.736<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,286 associations by consensus.

RN7SKP64 vs ZC3H18_S532 — LSCC

Per-sample scatter of RN7SKP64 vs ZC3H18_S532 in LSCC (Pearson r = 0.38).

Explore this scatter interactively →

Exploration