RN7SKP58

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP58 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,660 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RN7SKP58-associated GO terms across cancer lineages are Positive regulation of ubiquitin-dependent protein catabolic process, Arp2/3 complex-mediated actin nucleation, and Vacuole organization. Each is linked with RN7SKP58 in more than 11 cancer types. Because this analysis shows association rather than direction, both RN7SKP58-to-partner and partner-to-RN7SKP58 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP58→partner) and Y-score (partner→RN7SKP58) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADPositive regulation of ubiquitin-dependent protein catabolic process →+0.049+0.084<.001<.001311
STADArp2/3 complex-mediated actin nucleation →+0.049+0.088<.001<.001311
STADVacuole organization →+0.051+0.111<.001<.001311
STADNegative regulation of cytoskeleton organization →+0.039+0.078<.001<.001311
STADRegulation of microtubule polymerization →+0.045+0.098<.001<.001311
STADProtein polymerization →+0.047+0.104<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,660 associations by consensus.

Exploration