RN7SKP39

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP39 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,816 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RN7SKP39-associated GO terms across cancer lineages are Positive regulation of proteasomal protein catabolic process, Methylation, and Regulation of double-strand break repair. Each is linked with RN7SKP39 in more than 9 cancer types. Because this analysis shows association rather than direction, both RN7SKP39-to-partner and partner-to-RN7SKP39 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP39→partner) and Y-score (partner→RN7SKP39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADPositive regulation of proteasomal protein catabolic process →+0.081+0.142<.001<.001310
STADMethylation →+0.082+0.103<.001<.001310
STADRegulation of double-strand break repair →+0.077+0.082<.001<.001310
STADRibose phosphate biosynthetic process →+0.092+0.076<.001<.001310
STADProtein folding →+0.089+0.076<.001<.001310
STADPositive regulation of cell growth →+0.064+0.093<.001.00239
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,816 associations by consensus.

Exploration