RN7SKP269

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP269 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,120 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RN7SKP269-associated proteins across cancer lineages are VPS13C_S737, WDR5, and RERE. Each is linked with RN7SKP269 in more than 3 cancer types. Because this analysis shows association rather than direction, both RN7SKP269-to-partner and partner-to-RN7SKP269 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP269→partner) and Y-score (partner→RN7SKP269) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMVPS13C_S737 →-0.368-0.530.001<.00133
LSCCWDR5 →+0.286+0.466<.001<.00133
GBMRERE →+0.223+0.307<.001.00333
GBMRERE_S656 →+0.297+0.364<.001<.00133
PDACTMPO →+0.281+0.389<.001.00733
CCRCCTMPO_T208 →+0.779+0.586<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,120 associations by consensus.

Exploration