RN7SKP239

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP239 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,973 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible RN7SKP239-associated proteins across cancer lineages are RASA1, OCLN_S313, and IGF2BP2. Each is linked with RN7SKP239 in more than 3 cancer types. Because this analysis shows association rather than direction, both RN7SKP239-to-partner and partner-to-RN7SKP239 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP239→partner) and Y-score (partner→RN7SKP239) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACRASA1 →+0.343+0.522.003.00334
HNSCOCLN_S313 →+1.943+2.300.004.00733
HNSCIGF2BP2 →+0.482+0.728.002.00433
COADPISD →-0.365-0.548.001.00133
LSCCPDIA5 →-0.354-0.821<.001<.00133
BRCAPDIA6 →-0.447-1.026<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,973 associations by consensus.

Exploration