RN7SKP235

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP235 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,013 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SKP235-associated proteins across cancer lineages are HPF1, AIFM2, and NES_S702. Each is linked with RN7SKP235 in more than 3 cancer types. Because this analysis shows association rather than direction, both RN7SKP235-to-partner and partner-to-RN7SKP235 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP235→partner) and Y-score (partner→RN7SKP235) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCHPF1 →+0.365+0.452<.001<.00134
GBMAIFM2 →-0.333-0.286<.001.00334
GBMNES_S702 →-0.501-0.284<.001<.00133
PDACNES_S746 →-0.413-0.512<.001<.00133
GBMPCF11 →+0.238+0.330<.001.00133
GBMUSF1 →+0.283+0.352<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,013 associations by consensus.

Exploration