RN7SKP233

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP233 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,873 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SKP233-associated proteins across cancer lineages are NACAD, APP, and APTX_S118. Each is linked with RN7SKP233 in more than 1 cancer types. Because this analysis shows association rather than direction, both RN7SKP233-to-partner and partner-to-RN7SKP233 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SKP233 versus NACAD in LSCC, with a Pearson correlation of 0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP233→partner) and Y-score (partner→RN7SKP233) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCNACAD →+0.377+0.414.007.00732
LUADAPP →+0.517+0.253<.001.00432
LSCCAPTX_S118 →-0.488-0.559.007.00832
GBMFBXO2 →+0.743+1.192<.001<.00132
LSCCSNAPC3 →-0.197-0.396.009.00831
LSCCSNUPN →-0.246-0.502<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,873 associations by consensus.

RN7SKP233 vs NACAD — LSCC

Per-sample scatter of RN7SKP233 vs NACAD in LSCC (Pearson r = 0.26).

Explore this scatter interactively →

Exploration