RN7SKP196

Across TCGA patient cohorts, RN7SKP196 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,107 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RN7SKP196-associated GO terms across cancer lineages are Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, Negative regulation of protein catabolic process, and Microtubule-based transport. Each is linked with RN7SKP196 in more than 7 cancer types. Because this analysis shows association rather than direction, both RN7SKP196-to-partner and partner-to-RN7SKP196 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay grouped by RN7SKP196-low versus RN7SKP196-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP196→partner) and Y-score (partner→RN7SKP196) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →	+0.113	+0.105	<.001	<.001	3	8
STAD	Negative regulation of protein catabolic process →	+0.114	+0.120	<.001	<.001	3	8
STAD	Microtubule-based transport →	+0.076	+0.093	<.001	<.001	3	7
STAD	RNA-templated DNA biosynthetic process →	+0.120	+0.101	<.001	<.001	3	7
STAD	Base-excision repair →	+0.113	+0.110	<.001	<.001	3	7
STAD	Positive regulation of proteolysis involved in protein catabolic process →	+0.117	+0.111	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,107 associations by consensus.

Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay by RN7SKP196 expression — STAD

Explore this box plot interactively →