RN7SKP169

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP169 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,183 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SKP169-associated proteins across cancer lineages are RAD21_S545, SMIM20, and SMCR8_S467. Each is linked with RN7SKP169 in more than 1 cancer types. Because this analysis shows association rather than direction, both RN7SKP169-to-partner and partner-to-RN7SKP169 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP169→partner) and Y-score (partner→RN7SKP169) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRAD21_S545 →+0.408+0.443.002.00132
HNSCSMIM20 →+0.314+0.650<.001<.00132
LSCCSMCR8_S467 →-0.653-0.245.003.00532
LSCCMTMR3_S633 →+0.610+0.334<.001<.00132
CCRCCNSD3_S561 →-0.336-0.101.005.00532
GBMNBEAL2 →-0.355-0.347<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,183 associations by consensus.

Exploration