RN7SKP139

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP139 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,469 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RN7SKP139-associated proteins across cancer lineages are MYEF2, XAB2, and XRCC1. Each is linked with RN7SKP139 in more than 3 cancer types. Because this analysis shows association rather than direction, both RN7SKP139-to-partner and partner-to-RN7SKP139 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP139→partner) and Y-score (partner→RN7SKP139) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMYEF2 →+0.888+1.065<.001<.00134
LSCCXAB2 →+0.215+0.947.004<.00133
GBMXRCC1 →+0.263+0.834<.001.00333
HNSCSH3BGRL3 →-0.306-0.722<.001.00133
GBMSMARCD1 →+0.273+0.877<.001<.00133
HNSCSRSF12_S219 →+1.954+2.477.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,469 associations by consensus.

Exploration