RN7SKP135

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP135 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,011 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible RN7SKP135-associated proteins across cancer lineages are PALMD, CAST_S440, and SMARCD1. Each is linked with RN7SKP135 in more than 2 cancer types. Because this analysis shows association rather than direction, both RN7SKP135-to-partner and partner-to-RN7SKP135 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SKP135 versus PALMD in GBM, with a Pearson correlation of -0.27.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP135→partner) and Y-score (partner→RN7SKP135) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPALMD →-0.490-0.193.002.00633
GBMCAST_S440 →-0.724-0.118.002.00433
HNSCSMARCD1 →+0.245+0.677<.001<.00132
HNSCSMARCE1 →+0.247+0.685<.001<.00132
LSCCSPAST →+0.346+0.571<.001<.00132
HNSCSRSF3 →+0.180+0.902<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,011 associations by consensus.

RN7SKP135 vs PALMD — GBM

Per-sample scatter of RN7SKP135 vs PALMD in GBM (Pearson r = -0.27).

Explore this scatter interactively →

Exploration