RN7SKP109

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP109 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,741 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RN7SKP109-associated GO terms across cancer lineages are Regulation of double-strand break repair, Positive regulation of chromosome organization, and Polyadenylation-dependent RNA catabolic process. Each is linked with RN7SKP109 in more than 11 cancer types. Because this analysis shows association rather than direction, both RN7SKP109-to-partner and partner-to-RN7SKP109 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP109→partner) and Y-score (partner→RN7SKP109) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRegulation of double-strand break repair →+0.081+0.363<.001<.001312
STADPositive regulation of chromosome organization →+0.097+0.345<.001<.001311
ESCAPolyadenylation-dependent RNA catabolic process →+0.078+0.220<.001.001311
ESCARegulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →+0.074+0.165<.001<.001310
STADPositive regulation of double-strand break repair →+0.083+0.339<.001<.001310
STADPositive regulation of DNA metabolic process →+0.087+0.358<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,741 associations by consensus.

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