RN7SKP1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,453 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RN7SKP1-associated proteins across cancer lineages are SH3BGRL3, TRIM21, and TWF2. Each is linked with RN7SKP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both RN7SKP1-to-partner and partner-to-RN7SKP1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP1→partner) and Y-score (partner→RN7SKP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSH3BGRL3 →-0.519-1.432<.001<.00134
HNSCTRIM21 →-0.398-1.075.001<.00133
LSCCTWF2 →-0.281-0.993<.001<.00133
HNSCWASHC2C →-0.314-1.138<.001.00133
HNSCWASHC4 →-0.146-1.242<.001<.00133
HNSCRPRD2 →+0.318+1.087<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,453 associations by consensus.

Exploration