RMDN3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RMDN3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,606 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible RMDN3-associated GO terms across cancer lineages are Regulation of intracellular estrogen receptor signaling pathway, Endosomal vesicle fusion, and Negative regulation of intracellular estrogen receptor signaling pathway. Each is linked with RMDN3 in more than 12 cancer types. Because this analysis shows association rather than direction, both RMDN3-to-partner and partner-to-RMDN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of intracellular estrogen receptor signaling pathway grouped by RMDN3-low versus RMDN3-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RMDN3→partner) and Y-score (partner→RMDN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCRegulation of intracellular estrogen receptor signaling pathway →+0.098+1.067.005.001313
SKINEndosomal vesicle fusion →+0.098+0.626<.001<.001312
KIDNEYNegative regulation of intracellular estrogen receptor signaling pathway →+0.153+0.756<.001.002311
BREASTLysosome organization →+0.065+0.737<.001<.001310
BREASTLytic vacuole organization →+0.065+0.737<.001<.001310
BLOOD_LymphomaFormation of cytoplasmic translation initiation complex →+0.097+0.947<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,606 associations by consensus.

Regulation of intracellular estrogen receptor signaling pathway by RMDN3 expression — LUNG_NSCLC_LUSC

Box plot of Regulation of intracellular estrogen receptor signaling pathway in RMDN3-low vs RMDN3-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration