RITA1

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RITA1 mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RITA1-associated genes across cancer lineages are Class-switched memory B-cells, Melanocytes, and HSC. Each is linked with RITA1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RITA1-to-partner and partner-to-RITA1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Class-switched memory B-cells grouped by RITA1-low versus RITA1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RITA1→partner) and Y-score (partner→RITA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECClass-switched memory B-cells →-0.058-3.459.043.00521
UCECMelanocytes →-0.011-3.405.037.00521
UCECHSC →+0.138+3.470.012.00311
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Class-switched memory B-cells by RITA1 expression — UCEC

Box plot of Class-switched memory B-cells in RITA1-low vs RITA1-high samples in UCEC.

Explore this box plot interactively →

Exploration