RIPPLY3

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RIPPLY3 mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible RIPPLY3-associated genes across cancer lineages are mv Endothelial cells and Th2 cells. Each is linked with RIPPLY3 in more than 1 cancer types. Because this analysis shows association rather than direction, both RIPPLY3-to-partner and partner-to-RIPPLY3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RIPPLY3→partner) and Y-score (partner→RIPPLY3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMmv Endothelial cells →-0.028-3.263.021.01031
SKCMTh2 cells →+0.253+1.880.001.03231
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

Exploration