RIOK1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RIOK1 mutation is significantly associated with the total protein of many other genes, with 49 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RIOK1-associated genes across cancer lineages are eEF2, A-Raf_pS299, and ERK2. Each is linked with RIOK1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RIOK1-to-partner and partner-to-RIOK1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by RIOK1-low versus RIOK1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RIOK1→partner) and Y-score (partner→RIOK1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.403+2.321.007.03431
UCECA-Raf_pS299 →-0.195-2.321<.001.03331
UCECERK2 →+0.232+2.222.004.01131
UCECFoxM1 →+0.243+1.700.026.04431
UCECFOXO3a_pS318_S321 →-0.167-2.105.001.01731
UCECACVRL1 →-0.168-3.150.003.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 49 associations by consensus.

eEF2 by RIOK1 expression — UCEC

Box plot of eEF2 in RIOK1-low vs RIOK1-high samples in UCEC.

Explore this box plot interactively →

Exploration