RIMBP2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RIMBP2 mutation is significantly associated with the RNA expression of many other genes, with 8,049 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RIMBP2-associated genes across cancer lineages are SKA1, CHAF1B, and NDC80. Each is linked with RIMBP2 in more than 5 cancer types. Because this analysis shows association rather than direction, both RIMBP2-to-partner and partner-to-RIMBP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SKA1 grouped by RIMBP2-low versus RIMBP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RIMBP2→partner) and Y-score (partner→RIMBP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSKA1 →+0.645+1.595<.001<.00136
LUADCHAF1B →+0.680+3.087<.001<.00136
UCECNDC80 →+0.570+1.360<.001<.00136
UCECCACYBP →+0.547+1.595<.001<.00136
STADNARS1 →+0.521+3.338.006.00536
LUADTEX30 →+0.553+3.087<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,049 associations by consensus.

SKA1 by RIMBP2 expression — UCEC

Box plot of SKA1 in RIMBP2-low vs RIMBP2-high samples in UCEC.

Explore this box plot interactively →

Exploration