RILP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RILP mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RILP-associated genes across cancer lineages are BPIFB6, ZBBX, and KCNU1. Each is linked with RILP in more than 1 cancer types. Because this analysis shows association rather than direction, both RILP-to-partner and partner-to-RILP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, BPIFB6 grouped by RILP-low versus RILP-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RILP→partner) and Y-score (partner→RILP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEBPIFB6 →+0.020+4.437<.001.00431
LARGE_INTESTINEZBBX →+0.146+3.777<.001.00731
LARGE_INTESTINEKCNU1 →+0.050+3.930<.001.00331
LARGE_INTESTINEKRTAP7-1 →+0.048+4.437<.001.00431
LARGE_INTESTINEINSRR →+0.039+4.584<.001.00331
LARGE_INTESTINENOVA2 →+0.323+3.898<.001.00521
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

BPIFB6 by RILP expression — LARGE_INTESTINE

Box plot of BPIFB6 in RILP-low vs RILP-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration