RIDA

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RIDA RNA expression is significantly associated with the go_rna of many other GO terms, with 3,760 significant associations in total. BONE shows the largest number of these associations.

The most reproducible RIDA-associated GO terms across cancer lineages are Glial cell migration, Mitochondrial translational elongation, and Mitochondrial gene expression. Each is linked with RIDA in more than 11 cancer types. Because this analysis shows association rather than direction, both RIDA-to-partner and partner-to-RIDA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Glial cell migration grouped by RIDA-low versus RIDA-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RIDA→partner) and Y-score (partner→RIDA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEGlial cell migration →-0.152-1.405.005.004312
BONEMitochondrial translational elongation →+0.160+1.588<.001<.001311
LIVERMitochondrial gene expression →+0.069+0.692.002.004310
KIDNEYRNA modification →+0.027+1.015.009.002310
OESOPHAGUSBlastocyst growth →+0.202+1.311.001.001211
SOFT_TISSUEViral genome replication →-0.132-0.727<.001.005310
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,760 associations by consensus.

Glial cell migration by RIDA expression — BONE

Box plot of Glial cell migration in RIDA-low vs RIDA-high samples in BONE.

Explore this box plot interactively →

Exploration