RHPN1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RHPN1 mutation is significantly associated with the RNA expression of many other genes, with 2,847 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RHPN1-associated genes across cancer lineages are CHAF1A, RNA5SP105, and RPL23AP4. Each is linked with RHPN1 in more than 2 cancer types. Because this analysis shows association rather than direction, both RHPN1-to-partner and partner-to-RHPN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHAF1A grouped by RHPN1-low versus RHPN1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RHPN1→partner) and Y-score (partner→RHPN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCHAF1A →+0.777+2.684<.001<.00133
SKCMRNA5SP105 →+0.247+4.634<.001.00333
READRPL23AP4 →+0.171+5.039<.001.00832
UCECHIRIP3 →+0.534+2.673<.001<.00132
UCECSAR1B →+0.508+3.321<.001<.00132
UCECBUB3 →+0.517+2.775<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,847 associations by consensus.

CHAF1A by RHPN1 expression — UCEC

Box plot of CHAF1A in RHPN1-low vs RHPN1-high samples in UCEC.

Explore this box plot interactively →

Exploration