RHOF

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RHOF mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. LIHC shows the largest number of these associations.

The most reproducible RHOF-associated genes across cancer lineages are Astrocytes and Class-switched memory B-cells. Each is linked with RHOF in more than 1 cancer types. Because this analysis shows association rather than direction, both RHOF-to-partner and partner-to-RHOF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Astrocytes grouped by RHOF-low versus RHOF-high in LIHC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RHOF→partner) and Y-score (partner→RHOF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIHCAstrocytes →+0.164+5.479<.001.04331
UCECClass-switched memory B-cells →-0.064-3.169.041.02011
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

Astrocytes by RHOF expression — LIHC

Box plot of Astrocytes in RHOF-low vs RHOF-high samples in LIHC.

Explore this box plot interactively →

Exploration