RGS6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RGS6 mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RGS6-associated genes across cancer lineages are eIF4E, MEK1, and ATM. Each is linked with RGS6 in more than 2 cancer types. Because this analysis shows association rather than direction, both RGS6-to-partner and partner-to-RGS6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RGS6→partner) and Y-score (partner→RGS6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCeIF4E →+0.151+2.821.035.03523
UCECMEK1 →+0.455+2.000<.001<.00132
UCECATM →-0.462-2.087.001.00532
UCECEGFR_pY1068 →-0.181-1.716.026.00331
UCECeIF4G →+0.239+2.115.017.01631
UCECFoxM1 →+0.168+1.459.045.01231
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

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