RGS4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RGS4 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible RGS4-associated genes across cancer lineages are KLHL40, CST9, and MRGPRG. Each is linked with RGS4 in more than 1 cancer types. Because this analysis shows association rather than direction, both RGS4-to-partner and partner-to-RGS4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KLHL40 grouped by RGS4-low versus RGS4-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RGS4→partner) and Y-score (partner→RGS4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaKLHL40 →+0.013+5.209<.001.00531
BLOOD_LymphomaCST9 →+0.119+5.209<.001.00531
BLOOD_LymphomaMRGPRG →+0.056+5.209<.001.00531
BLOOD_LymphomaSPATA8 →+0.217+4.867<.001.00931
BLOOD_LymphomaOR2T4 →+0.022+5.209<.001.00531
LARGE_INTESTINETECRL →+0.026+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

KLHL40 by RGS4 expression — BLOOD_Lymphoma

Box plot of KLHL40 in RGS4-low vs RGS4-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration