RGS17

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RGS17 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,687 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible RGS17-associated GO terms across cancer lineages are Regulation of telomere capping, Protein localization to lysosome, and Autophagosome assembly. Each is linked with RGS17 in more than 7 cancer types. Because this analysis shows association rather than direction, both RGS17-to-partner and partner-to-RGS17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of telomere capping grouped by RGS17-low versus RGS17-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RGS17→partner) and Y-score (partner→RGS17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINRegulation of telomere capping →+0.077+0.821.001<.00138
LUNG_SCLCProtein localization to lysosome →+0.089+1.785.002.00138
BLOOD_MyelomaAutophagosome assembly →+0.078+0.410.002.00837
URINARY_TRACTPositive regulation of excitatory synapse assembly →-1.403-1.336<.001<.00137
SKINRegulation of dense core granule biogenesis →+0.817+0.993<.001<.00137
CNSSNARE complex disassembly →+0.158+1.308<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,687 associations by consensus.

Regulation of telomere capping by RGS17 expression — SKIN

Box plot of Regulation of telomere capping in RGS17-low vs RGS17-high samples in SKIN.

Explore this box plot interactively →

Exploration