RGPD4-AS1

Across TCGA patient cohorts, RGPD4-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,214 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RGPD4-AS1-associated GO terms across cancer lineages are Regulation of DNA repair, Transcription initiation at RNA polymerase II promoter, and Response to UV. Each is linked with RGPD4-AS1 in more than 9 cancer types. Because this analysis shows association rather than direction, both RGPD4-AS1-to-partner and partner-to-RGPD4-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA repair grouped by RGPD4-AS1-low versus RGPD4-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RGPD4-AS1→partner) and Y-score (partner→RGPD4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of DNA repair →	+0.053	+0.092	<.001	<.001	3	10
ESCA	Transcription initiation at RNA polymerase II promoter →	+0.067	+0.097	<.001	.001	3	10
STAD	Response to UV →	+0.053	+0.092	<.001	<.001	3	10
STAD	Nucleobase-containing compound transport →	+0.056	+0.091	<.001	<.001	3	9
STAD	Blastocyst development →	+0.047	+0.090	<.001	<.001	3	9
ESCA	Positive regulation of chromosome organization →	+0.071	+0.101	<.001	.004	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,214 associations by consensus.

Regulation of DNA repair by RGPD4-AS1 expression — STAD

Explore this box plot interactively →