RGMB

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RGMB mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RGMB-associated genes across cancer lineages are MAPK_pT202_Y204, N-Cadherin, and PCNA. Each is linked with RGMB in more than 1 cancer types. Because this analysis shows association rather than direction, both RGMB-to-partner and partner-to-RGMB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MAPK_pT202_Y204 grouped by RGMB-low versus RGMB-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RGMB→partner) and Y-score (partner→RGMB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMAPK_pT202_Y204 →-0.461-2.000.029.03231
UCECN-Cadherin →+0.216+2.331.023.01931
UCECPCNA →+0.196+2.700.044.00631
UCECCaspase-7-cleavedD198 →+0.733+2.000.006.03231
UCECCD20 →+0.131+2.189.027.03431
UCECp62 Lck ligand →+0.397+3.009.006.01921
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

MAPK_pT202_Y204 by RGMB expression — UCEC

Box plot of MAPK_pT202_Y204 in RGMB-low vs RGMB-high samples in UCEC.

Explore this box plot interactively →

Exploration