RFPL3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RFPL3 protein abundance is significantly associated with the RNA expression of many other genes, with 4,190 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible RFPL3-associated genes across cancer lineages are MIR22HG, MIR645, and RN7SL600P. Each is linked with RFPL3 in more than 3 cancer types. Because this analysis shows association rather than direction, both RFPL3-to-partner and partner-to-RFPL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RFPL3 versus MIR22HG in UCEC, with a Pearson correlation of -0.54.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RFPL3→partner) and Y-score (partner→RFPL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR22HG →-1.310-0.851.009.00334
HNSCMIR645 →-1.716-0.601<.001<.00133
CCRCCRN7SL600P →-1.014-0.756<.001<.00133
CCRCCRN7SL473P →-0.977-0.669<.001.00133
CCRCCIL10 →-0.484-0.618<.001<.00133
BRCATNF →-0.988-0.737<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,190 associations by consensus.

RFPL3 vs MIR22HG — UCEC

Per-sample scatter of RFPL3 vs MIR22HG in UCEC (Pearson r = -0.54).

Explore this scatter interactively →

Exploration