REXO4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, REXO4 protein abundance is significantly associated with the RNA expression of many other genes, with 3,500 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible REXO4-associated genes across cancer lineages are ITPK1, EXD2, and PNPO. Each is linked with REXO4 in more than 7 cancer types. Because this analysis shows association rather than direction, both REXO4-to-partner and partner-to-REXO4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, REXO4 versus ITPK1 in BLOOD_Lymphoma, with a Pearson correlation of 0.83.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (REXO4→partner) and Y-score (partner→REXO4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaITPK1 →+1.729+1.553<.001<.00138
OVARYEXD2 →+0.675+1.685.002.00634
LUNG_SCLCPNPO →+0.909+1.258.001.00134
BLOOD_LymphomaRETSAT →+1.111+1.084.001.00325
BLOOD_LeukemiaFBXW4 →+0.659+0.788.001<.00134
SKINFSD1 →-1.605-0.890<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,500 associations by consensus.

REXO4 vs ITPK1 — BLOOD_Lymphoma

Per-sample scatter of REXO4 vs ITPK1 in BLOOD_Lymphoma (Pearson r = 0.83).

Explore this scatter interactively →

Exploration