REXO1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, REXO1 mutation is significantly associated with the RNA expression of many other genes, with 3,304 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible REXO1-associated genes across cancer lineages are AP1S3, EME1, and SFXN1. Each is linked with REXO1 in more than 2 cancer types. Because this analysis shows association rather than direction, both REXO1-to-partner and partner-to-REXO1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AP1S3 grouped by REXO1-low versus REXO1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (REXO1→partner) and Y-score (partner→REXO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAP1S3 →+0.636+2.807<.001<.00133
UCECEME1 →+0.573+2.069<.001<.00133
COADSFXN1 →+0.546+3.342.001.00533
UCECCENPN →+0.774+2.399<.001<.00133
UCECCRK →+0.433+3.939<.001<.00133
UCECPDP2 →+0.370+1.841<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,304 associations by consensus.

AP1S3 by REXO1 expression — UCEC

Box plot of AP1S3 in REXO1-low vs REXO1-high samples in UCEC.

Explore this box plot interactively →

Exploration