REP15

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, REP15 mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible REP15-associated genes across cancer lineages are Notch1, VHL, and Caspase-7-cleavedD198. Each is linked with REP15 in more than 1 cancer types. Because this analysis shows association rather than direction, both REP15-to-partner and partner-to-REP15 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Notch1 grouped by REP15-low versus REP15-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (REP15→partner) and Y-score (partner→REP15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNotch1 →+0.192+3.321.009.01031
UCECVHL →-1.076-3.169.002.01931
UCECCaspase-7-cleavedD198 →+1.185+3.321<.001.01031
UCECp62 Lck ligand →+0.552+3.321.001.01021
UCECPCNA →+0.311+3.321.006.01021
UCECPRDX1 →+0.340+3.000.001.03621
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

Notch1 by REP15 expression — UCEC

Box plot of Notch1 in REP15-low vs REP15-high samples in UCEC.

Explore this box plot interactively →

Exploration