REN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, REN protein abundance is significantly associated with the RNA expression of many other genes, with 1,143 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible REN-associated genes across cancer lineages are SLC52A3, MYCL, and SH3BGRL3. Each is linked with REN in more than 1 cancer types. Because this analysis shows association rather than direction, both REN-to-partner and partner-to-REN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, REN versus SLC52A3 in UCEC, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (REN→partner) and Y-score (partner→REN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSLC52A3 →+1.188+0.887.007.00231
UCECMYCL →+0.830+0.914.002.00231
UCECSH3BGRL3 →-0.453-1.024.003.00831
UCECPPP1R18 →-0.602-1.076.003.00931
UCECNPFFR1 →+0.631+1.006.001<.00131
UCECDDX4 →+0.400+0.997.007.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,143 associations by consensus.

REN vs SLC52A3 — UCEC

Per-sample scatter of REN vs SLC52A3 in UCEC (Pearson r = 0.39).

Explore this scatter interactively →

Exploration