RELN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RELN protein abundance is significantly associated with the RNA expression of many other genes, with 2,404 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RELN-associated genes across cancer lineages are HPS4, ZNF346, and TLCD5. Each is linked with RELN in more than 1 cancer types. Because this analysis shows association rather than direction, both RELN-to-partner and partner-to-RELN results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RELN→partner) and Y-score (partner→RELN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHPS4 →-0.769-0.542.006.00232
UCECZNF346 →-0.673-0.672<.001.00332
HNSCTLCD5 →-0.936-1.213<.001.00432
UCECDEFB136 →-0.806-0.494.003.00832
UCECTSPOAP1-AS1 →-1.237-0.551<.001.00432
LSCCCOMMD4 →-0.338-0.566.005<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,404 associations by consensus.

Exploration