REG1A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, REG1A mutation is significantly associated with the RNA expression of many other genes, with 19 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible REG1A-associated genes across cancer lineages are OR13C3, CT45A7, and LHCGR. Each is linked with REG1A in more than 1 cancer types. Because this analysis shows association rather than direction, both REG1A-to-partner and partner-to-REG1A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR13C3 grouped by REG1A-low versus REG1A-high in LUNG_NSCLC_LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (REG1A→partner) and Y-score (partner→REG1A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADOR13C3 →+0.010+2.887<.001.00932
LUNG_NSCLC_LUADCT45A7 →+0.032+3.684<.001<.00132
BLOOD_LeukemiaLHCGR →+0.268+4.152<.001.00931
BLOOD_LeukemiaOR4D9 →+0.004+4.969<.001.00331
BLOOD_LeukemiaOR2T10 →+0.602+4.409<.001.00531
BLOOD_LeukemiaKRTAP19-5 →+0.686+4.969<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

OR13C3 by REG1A expression — LUNG_NSCLC_LUAD

Box plot of OR13C3 in REG1A-low vs REG1A-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration