RECQL5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RECQL5 mutation is significantly associated with the RNA expression of many other genes, with 3,481 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RECQL5-associated genes across cancer lineages are SNRPD1, EIF5A, and SNORD115-45. Each is linked with RECQL5 in more than 2 cancer types. Because this analysis shows association rather than direction, both RECQL5-to-partner and partner-to-RECQL5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNRPD1 grouped by RECQL5-low versus RECQL5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RECQL5→partner) and Y-score (partner→RECQL5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNRPD1 →+0.346+1.747.003<.00133
UCECEIF5A →+0.259+1.536.007.00233
CESCSNORD115-45 →+0.287+4.757<.001.00432
COADRNFT2 →+0.459+3.361.004.00432
COADC6orf52 →+1.104+3.459<.001.00532
COADNFASC →-0.540-3.446.006.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,481 associations by consensus.

SNRPD1 by RECQL5 expression — UCEC

Box plot of SNRPD1 in RECQL5-low vs RECQL5-high samples in UCEC.

Explore this box plot interactively →

Exploration