RDH14

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RDH14 mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RDH14-associated genes across cancer lineages are MIR4438, RNU6-316P, and PNRC2P1. Each is linked with RDH14 in more than 1 cancer types. Because this analysis shows association rather than direction, both RDH14-to-partner and partner-to-RDH14 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4438 grouped by RDH14-low versus RDH14-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RDH14→partner) and Y-score (partner→RDH14) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR4438 →+0.393+7.816<.001.00831
UCECRNU6-316P →+0.337+4.386<.001<.00131
UCECPNRC2P1 →+0.990+3.544.003.00531
UCECHIGD1AP15 →+0.205+3.418<.001.00231
UCECRN7SL825P →+0.415+3.450.001.00631
UCECRNA5SP419 →+0.944+3.077<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

MIR4438 by RDH14 expression — SKCM

Box plot of MIR4438 in RDH14-low vs RDH14-high samples in SKCM.

Explore this box plot interactively →

Exploration