RDH13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RDH13 protein abundance is significantly associated with the RNA expression of many other genes, with 7,348 significant associations in total. COAD shows the largest number of these associations.

The most reproducible RDH13-associated genes across cancer lineages are TREM1, EPS8L1, and HK3. Each is linked with RDH13 in more than 3 cancer types. Because this analysis shows association rather than direction, both RDH13-to-partner and partner-to-RDH13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RDH13 versus TREM1 in COAD, with a Pearson correlation of -0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RDH13→partner) and Y-score (partner→RDH13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADTREM1 →-1.125-0.390<.001<.00134
CCRCCEPS8L1 →+1.096+0.709<.001<.00134
PDACHK3 →-1.062-0.388<.001<.00134
OVFUT2 →+0.912+0.526.005.00234
GBMSAMD12 →+0.734+0.472<.001<.00134
LUADFXYD3 →+0.663+0.364<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,348 associations by consensus.

RDH13 vs TREM1 — COAD

Per-sample scatter of RDH13 vs TREM1 in COAD (Pearson r = -0.60).

Explore this scatter interactively →

Exploration