RDH11

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RDH11 mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of RDH11’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where RDH11 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types RDH11 is over-expressed in tumor, although a few such as CCRCC and COAD show the opposite, repressed pattern.

CCRCC, COAD, and LSCC are the cancer types where RDH11 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RDH11 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCMaleIV−1.011<.00112view →
COADMaleII,III,IV−0.272<.00110view →
LSCCFemaleII,III,IV−0.390<.0016view →
PDACAllAll−0.598<.0015view →
HNSCAllAll−0.132.0491view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

RDH11–CCRCC

Tumor-vs-normal mass-spec protein box plot for RDH11 in CCRCC.

Open the CCRCC breakdown →

Exploration