RDH10

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RDH10 mutation is significantly associated with the RNA expression of many other genes, with 584 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RDH10-associated genes across cancer lineages are ATP5F1AP7, FBXO7, and POLDIP3. Each is linked with RDH10 in more than 1 cancer types. Because this analysis shows association rather than direction, both RDH10-to-partner and partner-to-RDH10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATP5F1AP7 grouped by RDH10-low versus RDH10-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RDH10→partner) and Y-score (partner→RDH10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAATP5F1AP7 →+0.044+5.112<.001.00131
UCECFBXO7 →+0.442+3.721.007<.00131
UCECPOLDIP3 →+0.542+3.499.005.00231
UCECL3MBTL2 →+0.452+3.625.001.00131
UCECPHF5A →+0.656+3.332<.001.00531
UCECAHSA1 →+0.563+2.617<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 584 associations by consensus.

ATP5F1AP7 by RDH10 expression — BLCA

Box plot of ATP5F1AP7 in RDH10-low vs RDH10-high samples in BLCA.

Explore this box plot interactively →

Exploration