RDH10

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RDH10 mutation is significantly associated with the RNA expression of many other genes, with 23 significant associations in total. PANCREAS shows the largest number of these associations.

The most reproducible RDH10-associated genes across cancer lineages are OR1N1, ATXN3L, and PTCRA. Each is linked with RDH10 in more than 1 cancer types. Because this analysis shows association rather than direction, both RDH10-to-partner and partner-to-RDH10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR1N1 grouped by RDH10-low versus RDH10-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RDH10→partner) and Y-score (partner→RDH10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASOR1N1 →+0.042+5.000<.001.00632
PANCREASATXN3L →+0.035+5.000<.001.00631
PANCREASPTCRA →+0.023+5.614<.001.00231
PANCREASDHRS7C →+0.065+5.000<.001.00631
PANCREASZIM2 →+0.035+5.000<.001.00631
BREASTCSN1S1 →+0.025+3.963<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

OR1N1 by RDH10 expression — PANCREAS

Box plot of OR1N1 in RDH10-low vs RDH10-high samples in PANCREAS.

Explore this box plot interactively →

Exploration