RCVRN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RCVRN protein abundance is significantly associated with the RNA expression of many other genes, with 990 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RCVRN-associated genes across cancer lineages are SNCG, FAM177A1P1, and CACNG7. Each is linked with RCVRN in more than 1 cancer types. Because this analysis shows association rather than direction, both RCVRN-to-partner and partner-to-RCVRN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RCVRN versus SNCG in OV, with a Pearson correlation of 0.87.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RCVRN→partner) and Y-score (partner→RCVRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSNCG →+4.883+0.789.006.00632
OVFAM177A1P1 →+0.760+0.962.001.00132
OVCACNG7 →+0.049+0.789<.001.00631
OVBET1 →-0.520-0.980.009.00831
OVHPX →-0.804-0.980.002.00831
OVSLIRP →+1.431+0.789<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 990 associations by consensus.

RCVRN vs SNCG — OV

Per-sample scatter of RCVRN vs SNCG in OV (Pearson r = 0.87).

Explore this scatter interactively →

Exploration