RCVRN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RCVRN RNA expression is significantly associated with the go_rna of many other GO terms, with 1,333 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible RCVRN-associated GO terms across cancer lineages are Membrane raft assembly, Regulation of mast cell activation, and Plasma membrane raft assembly. Each is linked with RCVRN in more than 2 cancer types. Because this analysis shows association rather than direction, both RCVRN-to-partner and partner-to-RCVRN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Membrane raft assembly grouped by RCVRN-low versus RCVRN-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RCVRN→partner) and Y-score (partner→RCVRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINMembrane raft assembly →+0.099+0.589.002.00633
SKINRegulation of mast cell activation →-0.093-0.646.003.00433
STOMACHPlasma membrane raft assembly →+0.157+0.047.002.00633
BLOOD_LymphomaRegulation of AV node cell action potential →-0.617-0.177.002.00833
STOMACHEstablishment of apical/basal cell polarity →+0.173+0.046.001.00833
STOMACHEstablishment of monopolar cell polarity →+0.136+0.046.005.00833
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,333 associations by consensus.

Membrane raft assembly by RCVRN expression — SKIN

Box plot of Membrane raft assembly in RCVRN-low vs RCVRN-high samples in SKIN.

Explore this box plot interactively →

Exploration