RCOR3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RCOR3 mutation is significantly associated with the RNA expression of many other genes, with 543 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RCOR3-associated genes across cancer lineages are LINC01044, GPR160P2, and CENPU. Each is linked with RCOR3 in more than 2 cancer types. Because this analysis shows association rather than direction, both RCOR3-to-partner and partner-to-RCOR3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01044 grouped by RCOR3-low versus RCOR3-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RCOR3→partner) and Y-score (partner→RCOR3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADLINC01044 →+0.130+5.481<.001.00533
LIHCGPR160P2 →+0.035+4.033<.001.00232
UCECCENPU →+0.673+2.839.009.00132
UCECRBM47 →+0.658+3.928.005<.00132
UCECSFXN1 →+0.535+3.658.001.00132
UCECPBK →+0.837+2.818.009.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 543 associations by consensus.

LINC01044 by RCOR3 expression — LUAD

Box plot of LINC01044 in RCOR3-low vs RCOR3-high samples in LUAD.

Explore this box plot interactively →

Exploration