RCN3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RCN3 protein abundance is significantly associated with the RNA expression of many other genes, with 17,880 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RCN3-associated genes across cancer lineages are MYL9, CCN4, and ACTA2. Each is linked with RCN3 in more than 9 cancer types. Because this analysis shows association rather than direction, both RCN3-to-partner and partner-to-RCN3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RCN3 versus MYL9 in COAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RCN3→partner) and Y-score (partner→RCN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMYL9 →+1.600+0.584<.001<.001310
OVCCN4 →+1.521+0.684<.001<.001310
OVACTA2 →+1.971+0.696<.001<.001310
GBMCOL1A1 →+2.899+1.075<.001<.001310
OVFN1 →+2.109+0.636<.001<.001310
OVGLT8D2 →+1.458+0.765<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,880 associations by consensus.

RCN3 vs MYL9 — COAD

Per-sample scatter of RCN3 vs MYL9 in COAD (Pearson r = 0.42).

Explore this scatter interactively →

Exploration