RBMS3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBMS3 mutation is significantly associated with the RNA expression of many other genes, with 4,255 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RBMS3-associated genes across cancer lineages are CINP, NTMT1, and MIR3925. Each is linked with RBMS3 in more than 2 cancer types. Because this analysis shows association rather than direction, both RBMS3-to-partner and partner-to-RBMS3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CINP grouped by RBMS3-low versus RBMS3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBMS3→partner) and Y-score (partner→RBMS3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCINP →+0.202+1.839.004.00233
UCECNTMT1 →+0.640+1.830<.001<.00133
LUADMIR3925 →+0.654+5.888<.001.00232
SKCMEMID1 →-1.006-3.700.001.00132
SKCMGMFB →+0.638+2.594.005.00632
SKCMSNORD67 →+0.564+3.597.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,255 associations by consensus.

CINP by RBMS3 expression — UCEC

Box plot of CINP in RBMS3-low vs RBMS3-high samples in UCEC.

Explore this box plot interactively →

Exploration